Publications
You can run, you can hide: The epidemiology and statistical mechanics of zombies
We use a popular fictional disease, zombies, in order to introduce techniques used in modern epidemiology modeling, and ideas and techniques used in the numerical study of critical phenomena. We consider variants of zombie models, from fully connected continuous time dynamics to a full scale exact stochastic dynamic simulation of a zombie outbreak on the continental United States.
Measuring the impact of an instructional laboratory on the learning of introductory physics
We have analyzed the impact of taking an associated lab course on the final exam scores in two large introductory physics courses. Performance between students who did and did not take the lab course was compared using final exam questions from the associated courses that related to concepts from the lab courses. The population of students who took the lab in each case was somewhat different from those who did not enroll in the lab course in terms of background and major.
Shielding superconductors with thin films as applied to rf cavities for particle accelerators
Determining the optimal arrangement of superconducting layers to withstand large-amplitude ac magnetic fields is important for certain applications such as superconducting radio-frequency cavities. In this paper, we evaluate the shielding potential of the superconducting-film-insulating-film-superconductor (SIS′) structure, a configuration that could provide benefits in screening large ac magnetic fields.
Observations on variational and projector Monte Carlo methods
Variational Monte Carlo and various projector Monte Carlo (PMC) methods are presented in a unified manner. Similarities and differences between the methods and choices made in designing the methods are discussed. Both methods where the Monte Carlo walk is performed in a discrete space and methods where it is performed in a continuous space are considered. It is pointed out that the usual prescription for importance sampling may not be advantageous depending on the particular quantum Monte Carlo method used and the observables of interest, so alternate prescriptions are presented.
Overshoot during phenotypic switching of cancer cell populations
The dynamics of tumor cell populations is hotly debated: do populations derive hierarchically from a subpopulation of cancer stem cells (CSCs), or are stochastic transitions that mutate differentiated cancer cells to CSCs important? Here we argue that regulation must also be important. We sort human melanoma cells using three distinct cancer stem cell (CSC) markers-CXCR6, CD271 and ABCG2-and observe that the fraction of non-CSC-marked cells first overshoots to a higher level and then returns to the level of unsorted cells.
How grow-and-switch gravitropism generates root coiling and root waving growth responses in Medicago truncatula
Experimental studies show that plant root morphologies can vary widely from straight gravity-aligned primary roots to fractal-like root architectures. However, the opaqueness of soil makes it difficult to observe how environmental factors modulate these patterns. Here, we combine a transparent hydrogel growth medium with a custom built 3D laser scanner to directly image the morphology of Medicago truncatula primary roots. In our experiments, root growth is obstructed by an inclined plane in the growth medium.
SiNx layers on nanostructured Si solar cells: Effective for optical absorption and carrier collection
We compared nanopatterned Si solar cells with and without SiNx layers. The SiNx layer coating significantly improved the internal quantum efficiency of the nanopatterned cells at long wavelengths as well as short wavelengths, whereas the surface passivation helped carrier collection of flat cells mainly at short wavelengths. The surface nanostructured array enhanced the optical absorption and also concentrated incoming light near the surface in broad wavelength range.
Fluctuating charge order in the cuprates: Spatial anisotropy and feedback from superconductivity
We analyze the form of static charge susceptibility χ(q) in underdoped cuprates near axial momenta (Q,0) and (0,Q) at which short-range static charge order has been observed. We show that the momentum dependence of χ(q) is anisotropic, and the correlation length in the longitudinal direction is larger than in the transverse direction. We show that correlation lengths in both directions decrease once the system evolves into a superconductor, as a result of the competition between superconductivity and charge order. These results are in agreement with resonant x-ray scattering data [R.
Evidence for superconductivity in Li-decorated monolayer graphene
Monolayer graphene exhibits many spectacular electronic properties, with superconductivity being arguably the most notable exception. It was theoretically proposed that superconductivity might be induced by enhancing the electron-phonon coupling through the decoration of graphene with an alkali adatom superlattice [Profeta G, Calandra M, Mauri F (2012) Nat Phys 8(2): 131-134]. Although experiments have shown an adatom-induced enhancement of the electron-phonon coupling, superconductivity has never been observed.
Glass-to-cryogenic-liquid transitions in aqueous solutions suggested by crack healing
Observation of theorized glass-to-liquid transitions between lowdensity amorphous (LDA) and high-density amorphous (HDA) water states had been stymied by rapid crystallization below the homogeneous water nucleation temperature (∼235 K at 0.1 MPa). We report optical and X-ray observations suggestive of glass-toliquid transitions in these states. Crack healing, indicative of liquid, occurs when LDA ice transforms to cubic ice at 160 K, and when HDA ice transforms to the LDA state at temperatures as low as 120 K.