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Single-Molecule Studies Reveal Dynamics of DNA Unwinding by the Ring-Shaped T7 Helicase

Cornell Affiliated Author(s)

Author

D.S. Johnson
L. Bai
B.Y. Smith
S.S. Patel
M.D. Wang

Abstract

Helicases are molecular motors that separate DNA strands for efficient replication of genomes. We probed the kinetics of individual ring-shaped T7 helicase molecules as they unwound double-stranded DNA (dsDNA) or translocated on single-stranded DNA (ssDNA). A distinctive DNA sequence dependence was observed in the unwinding rate that correlated with the local DNA unzipping energy landscape. The unwinding rate increased ∼10-fold (approaching the ssDNA translocation rate) when a destabilizing force on the DNA fork junction was increased from 5 to 11 pN. These observations reveal a fundamental difference between the mechanisms of ring-shaped and nonring-shaped helicases. The observed force-velocity and sequence dependence are not consistent with a simple passive unwinding model. However, an active unwinding model fully supports the data even though the helicase on its own does not unwind at its optimal rate. This work offers insights into possible ways helicase activity is enhanced by associated proteins. © 2007 Elsevier Inc. All rights reserved.

Date Published

Journal

Cell

Volume

129

Issue

7

Number of Pages

1299-1309,

URL

https://www.scopus.com/inward/record.uri?eid=2-s2.0-34250766751&doi=10.1016%2fj.cell.2007.04.038&partnerID=40&md5=1f84277f7136bdec1991f97d345e9116

DOI

10.1016/j.cell.2007.04.038

Research Area

Group (Lab)

Michelle Wang Group

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